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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
35
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
42
October, 2019
1
February, 2020
Available data
42
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
43
Homo sapiens
Biosample type
43
tissue
Organ
776
liver
645
connective tissue
593
pancreas
489
adipose tissue
287
heart
265
brain
254
kidney
193
blood vessel
193
vasculature
158
bone element
137
artery
122
limb
118
epithelium
81
musculature of body
61
blood
61
bodily fluid
56
eye
43
nerve
37
embryo
25
spleen
18
ureter
16
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
43
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
43
AMP-T2D consortium
assay_title!
single cell RNA-seq
biosample_type!
primary cell
month_released!
August, 2022
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
35
5
2
1
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