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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
1
whole genome sequencing assay
Assay category
60
DNA accessibility
41
DNA methylation
1
DNA sequencing
Date released
101
May, 2022
1
August, 2021
Available data
1385
bam
1297
bigWig
853
fastq
833
bed narrowPeak
481
bigBed narrowPeak
422
tsv
160
tagAlign
109
bed broadPeak
109
bigBed broadPeak
101
zippedFastqFolder
68
bed bed3+
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
vcf
Organism
102
Homo sapiens
Biosample type
101
primary cell
1
cell line
Organ
80
epithelium
80
pancreas
1
liver
Project
101
HPAP
1
AMP
Lab
101
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
assay_title!
single cell RNA-seq
biosample_type!
tissue
BIOSAMPLE
ASSAY
102 results
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Clear Filters
WGBS
ATAC-seq
snATAC-seq
whole genome sequencing assay
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
Langerhans cell
21
pancreatic acinar cell
4
cell line
HepG2
1
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