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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
10
snATAC-seq
single cell RNA-seq
4
total RNA-seq
1
pCHi-C
Assay category
22
DNA accessibility
4
Transcription
Date released
10
April, 2020
8
February, 2021
8
February, 2023
1
March, 2020
Available data
8
bam
8
bed narrowPeak
4
bed bed3
4
txt
1
tsv
Organism
26
Homo sapiens
Biosample type
27
tissue
Organ
866
pancreas
787
liver
679
connective tissue
490
adipose tissue
453
epithelium
300
heart
290
kidney
283
brain
229
vasculature
223
blood vessel
159
bone element
139
artery
122
limb
94
musculature of body
68
blood
68
bodily fluid
61
eye
43
nerve
36
embryo
25
spleen
21
vein
18
ureter
16
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
10
LungMap
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
17
AMP-T2D consortium
10
Xin Sun, UCSD
assay_title!
single cell RNA-seq
files.file_type!
tar
month_released!
January, 2018
BIOSAMPLE
ASSAY
27 results
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ATAC-seq
snATAC-seq
total RNA-seq
pCHi-C
tissue
lung
10
1
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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