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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
Assay category
99
DNA binding
Target of assay
352
transcription factor
200
histone modification
199
histone
128
control
100
narrow histone mark
99
broad histone mark
82
recombinant protein
68
RNA binding protein
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
April, 2019
20
May, 2024
19
August, 2017
10
December, 2017
8
November, 2017
7
May, 2019
6
October, 2019
2
August, 2021
Available data
87
bigWig
86
bed narrowPeak
66
bam
55
bigBed narrowPeak
25
fastq
18
tagAlign
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
99
Homo sapiens
Biosample type
82
tissue
9
cell line
7
in vitro differentiated cells
1
primary cell
Organ
78
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
99
AMP
Genome assembly (visualization)
85
GRCh38
67
hg19
Lab
78
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
6
inconsistent control read length
assay_title!
single cell RNA-seq
files.file_type!
tar
BIOSAMPLE
ASSAY
99 results
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ChIP-seq
tissue
liver
22
left cardiac atrium
20
heart left ventricle
15
heart
8
heart right ventricle
7
+ See 3 more…
cell line
HepG2
9
in vitro differentiated cells
hepatocyte
7
primary cell
hepatocyte
1
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