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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
2
DNase-seq
1
FAIRE-seq
Assay category
58
DNA binding
3
DNA accessibility
Target of assay
51
transcription factor
11
histone
11
histone modification
10
RNA binding protein
10
chromatin remodeller
narrow histone mark
5
broad histone mark
Date released
27
December, 2018
14
January, 2019
12
November, 2018
8
October, 2019
Available data
73
bam
64
bigWig
61
bed narrowPeak
61
bigBed narrowPeak
59
fastq
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
61
Homo sapiens
Biosample type
53
cell line
8
primary cell
Organ
344
liver
94
brain
94
kidney
72
heart
72
pancreas
70
limb
61
epithelium
58
vasculature
55
blood vessel
53
blood
53
bodily fluid
41
musculature of body
23
connective tissue
19
artery
18
nerve
18
ureter
11
spleen
9
adipose tissue
8
vein
5
eye
Project
61
AMP
Genome assembly (visualization)
61
hg19
60
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_title!
single cell RNA-seq
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
DNase-seq
FAIRE-seq
cell line
GM12878
53
primary cell
endothelial cell of umbilical vein
5
2
1
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