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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
Assay category
5
3D chromatin structure
Date released
4
July, 2019
1
October, 2019
Available data
3068
bam
2853
bigWig
1607
bed narrowPeak
1388
tsv
1224
fastq
832
bigBed narrowPeak
398
tagAlign
148
txt
135
bed broadPeak
101
zippedFastqFolder
98
bigBed broadPeak
86
bed bed3+
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
tagAlign bed3+
1
vcf
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
1
pancreas
Project
5
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent assembly
assay_title!
single cell RNA-seq
files.file_type!
tagAlign bed3+
month_released!
June, 2019
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
5 results
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Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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