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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
458
total RNA-seq
single cell RNA-seq
3
pCHi-C
3
small RNA-seq
Assay category
461
Transcription
Date released
438
February, 2021
17
July, 2019
5
February, 2020
4
March, 2020
Available data
622
bam
575
bigWig
464
tsv
142
bed narrowPeak
89
bigBed narrowPeak
47
fastq
17
bed bed3+
16
bed broadPeak
15
bigBed broadPeak
14
tagAlign
3
bed bedMethyl
3
bedpe bed3+
3
bigBed bedMethyl
3
hic
2
hdf5
1
tar
Organism
464
Homo sapiens
Biosample type
408
tissue
52
cell line
4
primary cell
Organ
474
connective tissue
401
adipose tissue
337
pancreas
174
liver
86
epithelium
76
heart
62
blood vessel
62
vasculature
58
bone element
56
artery
23
brain
19
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
464
AMP
Genome assembly (visualization)
456
GRCh38
456
hg19
Lab
464
AMP-T2D consortium
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
464 results
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total RNA-seq
pCHi-C
small RNA-seq
tissue
adipose tissue
381
1
subcutaneous adipose tissue
7
1
omental fat pad
5
1
visceral abdominal adipose tissue
3
aorta
1
1
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cell line
smooth muscle cell of the coronary artery
52
primary cell
mesenchymal stem cell of adipose
1
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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