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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
12
ATAC-seq
10
snATAC-seq
single cell RNA-seq
1
pCHi-C
Assay category
62
Transcription
22
DNA accessibility
Date released
150
February, 2021
10
April, 2020
8
February, 2023
1
March, 2020
Available data
88
txt
66
bam
59
tsv
58
bigWig
8
bed narrowPeak
4
bed bed3
Organism
168
Homo sapiens
Biosample type
169
tissue
Organ
811
pancreas
755
liver
674
connective tissue
490
adipose tissue
448
epithelium
300
heart
283
brain
230
vasculature
224
blood vessel
168
kidney
158
bone element
139
artery
122
limb
95
musculature of body
61
blood
61
bodily fluid
61
eye
43
nerve
29
embryo
25
spleen
22
vein
18
ureter
16
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
159
AMP
10
LungMap
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
159
AMP-T2D consortium
10
Xin Sun, UCSD
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_title!
single cell RNA-seq
lab.title!
Kyle Gaulton, UCSD
month_released!
August, 2021
BIOSAMPLE
ASSAY
169 results
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RNA microarray
total RNA-seq
ATAC-seq
snATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
lung
10
1
acetabular part of hip bone
1
1
ilium
1
1
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