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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
single cell RNA-seq
34
ChIP-seq
1
Hi-C
Assay category
34
DNA binding
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
697
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
314
October, 2019
218
June, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2023
4
October, 2022
3
March, 2019
1
August, 2018
August, 2022
0
September, 2023
Available data
35
fastq
34
bam
30
bed narrowPeak
30
bigBed narrowPeak
30
bigWig
Organism
35
Homo sapiens
Biosample type
28
cell line
7
tissue
Organ
27
blood
27
bodily fluid
7
spleen
1
liver
Project
35
AMP
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
35
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_title!
single cell RNA-seq
lab.title!
Mark McCarthy, Oxford
month_released!
August, 2022
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
Hi-C
cell line
GM12878
27
HepG2
1
tissue
spleen
7
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