Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
single cell RNA-seq
25
ChIP-seq
15
total RNA-seq
10
ATAC-seq
2
Capture-C
1
RNA microarray
Assay category
25
DNA binding
15
Transcription
10
DNA accessibility
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
8
control
Date released
664
February, 2021
406
November, 2017
385
August, 2017
314
October, 2019
296
May, 2020
175
June, 2019
164
May, 2021
120
July, 2018
113
May, 2019
102
February, 2023
95
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
61
November, 2019
59
March, 2020
53
August, 2021
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
11
September, 2017
7
December, 2019
7
January, 2018
6
November, 2020
1
August, 2018
1
August, 2022
1
May, 2023
1
October, 2022
Available data
49
bam
31
bigWig
26
bed narrowPeak
24
tagAlign
15
tsv
3
bed bed3+
Organism
52
Homo sapiens
Biosample type
38
in vitro differentiated cells
10
cell line
4
primary cell
1
tissue
Organ
8
embryo
6
epithelium
4
liver
2
pancreas
1
adipose tissue
1
connective tissue
Project
53
AMP
Genome assembly (visualization)
41
GRCh38
40
hg19
Lab
120
Katalin Susztak, Upenn
53
AMP-T2D consortium
36
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
assay_title!
single cell RNA-seq
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
53 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Capture-C
RNA microarray
in vitro differentiated cells
neural progenitor cell
21
7
10
cell line
H1-hESC
8
EndoC_BH1
2
primary cell
hepatocyte
4
tissue
subcutaneous adipose tissue
1
Download