Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
12
total RNA-seq
5
ATAC-seq
3
small RNA-seq
2
pCHi-C
1
DNase-seq
1
RNA microarray
Assay category
23
DNA binding
15
Transcription
6
DNA accessibility
Target of assay
18
control
5
RNA binding protein
5
transcription factor
Date released
February, 2021
August, 2017
23
October, 2018
12
July, 2019
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
38
bam
25
fastq
21
bigWig
15
tsv
9
bed narrowPeak
7
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
Organism
46
Homo sapiens
Biosample type
44
tissue
2
primary cell
1
in vitro differentiated cells
Organ
681
liver
639
pancreas
393
epithelium
287
kidney
281
brain
234
heart
164
vasculature
158
blood vessel
116
limb
99
connective tissue
73
artery
69
musculature of body
61
eye
54
blood
54
bodily fluid
47
adipose tissue
43
nerve
37
embryo
22
vein
18
ureter
16
spleen
11
lung
9
bone element
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
47
AMP
Genome assembly (visualization)
24
hg19
21
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
single cell RNA-seq
month_released!
August, 2017
February, 2021
November, 2018
BIOSAMPLE
ASSAY
47 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
small RNA-seq
pCHi-C
DNase-seq
RNA microarray
tissue
omental fat pad
11
5
1
1
1
subcutaneous adipose tissue
12
5
1
1
adipose tissue
1
3
1
adipose tissue(adipose white tissue)
1
primary cell
mesenchymal stem cell of adipose
1
1
in vitro differentiated cells
white fat cell
1
Download