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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
105
ATAC-seq
56
ChIP-seq
single cell RNA-seq
1
pCHi-C
Assay category
190
Transcription
105
DNA accessibility
56
DNA binding
Target of assay
29
control
27
histone
27
histone modification
27
narrow histone mark
Date released
697
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
314
October, 2019
218
June, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
0
April, 2018
Available data
294
bam
265
bigWig
189
tsv
50
tagAlign
32
bed narrowPeak
11
fastq
5
bigBed narrowPeak
2
bed bed3+
Organism
352
Homo sapiens
Biosample type
199
tissue
152
primary cell
1
cell line
Organ
194
liver
11
pancreas
5
epithelium
Project
307
AMP
45
T1D
Genome assembly (visualization)
267
hg19
214
GRCh38
Lab
307
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
assay_title!
single cell RNA-seq
month_released!
September, 2020
BIOSAMPLE
ASSAY
352 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
islet of Langerhans
6
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 27 more…
cell line
HepG2
1
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