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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
total RNA-seq
15
ChIP-seq
10
snATAC-seq
single cell RNA-seq
8
ATAC-seq
Assay category
25
Transcription
18
DNA accessibility
15
DNA binding
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
697
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
314
October, 2019
218
June, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
25
tsv
17
fastq
15
bam
14
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
Organism
57
Homo sapiens
Biosample type
58
tissue
Organ
28
brain
10
lung
6
pancreas
3
adipose tissue
3
blood vessel
3
connective tissue
3
heart
3
limb
3
vasculature
2
artery
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
1
spleen
Project
48
AMP
10
LungMap
Genome assembly (visualization)
14
GRCh38
13
hg19
Lab
47
AMP-T2D consortium
10
Xin Sun, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
assay_title!
single cell RNA-seq
month_released!
September, 2017
BIOSAMPLE
ASSAY
58 results
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Clear Filters
total RNA-seq
ChIP-seq
snATAC-seq
ATAC-seq
tissue
brain
15
lung
10
body of pancreas
1
4
cerebellum (Hemisphere)
1
1
omental fat pad
1
1
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