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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
120
total RNA-seq
single cell RNA-seq
1
Hi-C
Assay category
154
DNA binding
120
Transcription
1
3D chromatin structure
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
33
transcription factor
27
control
7
RNA binding protein
2
chromatin remodeller
Date released
697
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
314
October, 2019
June, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
270
bam
243
bigWig
127
bed narrowPeak
127
bigBed narrowPeak
116
tsv
37
fastq
Organism
275
Homo sapiens
Biosample type
242
tissue
28
cell line
5
primary cell
Organ
122
pancreas
50
blood vessel
50
vasculature
28
brain
27
blood
27
bodily fluid
21
heart
7
limb
7
musculature of body
7
spleen
5
artery
5
epithelium
5
kidney
1
liver
Project
275
AMP
Genome assembly (visualization)
243
hg19
242
GRCh38
Lab
275
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
1
inconsistent control
assay_title!
single cell RNA-seq
month_released!
June, 2019
BIOSAMPLE
ASSAY
275 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
120
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 8 more…
cell line
GM12878
27
HepG2
1
primary cell
kidney epithelial cell
5
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