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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ATAC-seq
41
WGBS
single cell RNA-seq
26
total RNA-seq
22
snATAC-seq
6
ChIP-seq
Assay category
104
DNA accessibility
41
DNA methylation
26
Transcription
6
DNA binding
Target of assay
6
control
Date released
697
February, 2021
406
November, 2017
404
August, 2017
399
May, 2021
341
May, 2020
314
October, 2019
218
June, 2019
212
August, 2021
203
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
9
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
3
October, 2022
1
August, 2018
1
August, 2022
1
March, 2023
0
June, 2018
Available data
101
zippedFastqFolder
43
bed narrowPeak
35
bam
35
fastq
25
bigWig
7
txt
5
bigBed narrowPeak
3
bed bed3+
Organism
177
Homo sapiens
Biosample type
106
primary cell
71
tissue
Organ
115
pancreas
85
epithelium
40
liver
1
musculature of body
Project
101
HPAP
76
AMP
Genome assembly (visualization)
46
hg19
7
GRCh38
Lab
101
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
12
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
177 results
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Clear Filters
ATAC-seq
WGBS
total RNA-seq
snATAC-seq
ChIP-seq
primary cell
pancreatic alpha cell
24
25
pancreatic beta cell
15
16
Langerhans cell
21
pancreatic acinar cell
5
tissue
liver
20
20
islet of Langerhans
18
6
6
skeletal muscle tissue
1
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