Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ATAC-seq
73
total RNA-seq
single cell RNA-seq
32
ChIP-seq
Assay category
114
DNA accessibility
73
Transcription
32
DNA binding
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
695
February, 2021
399
May, 2021
357
August, 2017
307
October, 2019
216
June, 2019
204
February, 2023
178
August, 2021
147
May, 2020
126
May, 2022
120
July, 2018
120
May, 2019
95
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
72
September, 2018
61
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
34
December, 2018
34
November, 2018
31
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
October, 2022
2
December, 2019
1
August, 2018
1
August, 2022
0
September, 2023
Available data
162
bam
162
bigWig
72
fastq
71
tsv
46
bed narrowPeak
14
bigBed narrowPeak
Organism
219
Homo sapiens
Biosample type
219
primary cell
Organ
liver
72
pancreas
61
epithelium
Project
174
AMP
45
T1D
Genome assembly (visualization)
162
hg19
117
GRCh38
Lab
174
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
Audit category:
32
missing controlled_by
assay_title!
single cell RNA-seq
organ_slims!
liver
BIOSAMPLE
ASSAY
219 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
pancreatic ductal cell
4
4
13
pancreatic beta cell
4
10
pancreatic acinar cell
3
2
8
+ See 29 more…
See all biosamples
Download