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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
7
ATAC-seq
2
DNase-seq
1
total RNA-seq
Assay category
24
DNA binding
9
DNA accessibility
1
Transcription
Target of assay
19
histone
19
histone modification
14
broad histone mark
5
control
5
narrow histone mark
Date released
27
October, 2019
6
February, 2021
1
February, 2020
Available data
32
bam
27
bed narrowPeak
21
bigWig
20
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
tsv
Organism
34
Homo sapiens
Biosample type
34
tissue
Organ
866
pancreas
790
liver
680
connective tissue
491
adipose tissue
454
epithelium
300
heart
290
kidney
283
brain
230
vasculature
224
blood vessel
159
bone element
139
artery
122
limb
musculature of body
69
blood
69
bodily fluid
61
eye
nerve
37
embryo
25
spleen
22
vein
18
ureter
16
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
34
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
34
AMP-T2D consortium
assay_title!
single cell RNA-seq
organ_slims!
musculature of body
nerve
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
ATAC-seq
DNase-seq
total RNA-seq
tissue
tibial artery
23
1
2
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
islet of Langerhans
1
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