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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
Assay category
33
DNA binding
Target of assay
29
transcription factor
6
chromatin remodeller
6
histone
6
histone modification
3
broad histone mark
3
narrow histone mark
RNA binding protein
1
recombinant protein
Date released
17
August, 2017
8
November, 2017
4
October, 2017
3
November, 2018
1
December, 2017
Available data
33
fastq
32
bam
30
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
33
Homo sapiens
Biosample type
16
tissue
11
cell line
6
in vitro differentiated cells
Organ
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
11
liver
4
brain
1
embryo
Project
33
AMP
Genome assembly (visualization)
30
hg19
24
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
33
missing controlled_by
Audit category:
4
inconsistent control run_type
3
inconsistent control read length
assay_title!
small RNA-seq
snDrop-seq
organ_slims!
pancreas
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
33 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
brain
4
cell line
HepG2
11
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
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