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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
total RNA-seq
17
pCHi-C
12
ATAC-seq
Assay category
154
DNA binding
12
DNA accessibility
Target of assay
134
histone
134
histone modification
74
broad histone mark
60
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
176
May, 2021
172
May, 2022
109
August, 2021
47
September, 2023
45
February, 2021
43
September, 2020
40
May, 2024
21
February, 2023
19
April, 2020
16
January, 2021
14
May, 2023
10
November, 2020
7
August, 2020
5
March, 2019
5
March, 2023
3
October, 2022
1
October, 2017
Available data
129
bigWig
114
bed narrowPeak
84
bam
84
tagAlign
7
fastq
Organism
183
Homo sapiens
Biosample type
140
primary cell
42
in vitro differentiated cells
1
tissue
Organ
7
epithelium
7
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
101
T1D
75
AMP
7
HPAP
Genome assembly (visualization)
122
hg19
91
GRCh38
Lab
176
Kyle Gaulton, UCSD
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
1
inconsistent ontology term
assay_title!
small RNA-seq
total RNA-seq
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
183 results
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ChIP-seq
pCHi-C
ATAC-seq
primary cell
monocyte
84
1
CD8-positive, alpha-beta T cell
33
1
pancreatic alpha cell
5
CD4-positive, alpha-beta T cell
2
pancreatic beta cell
2
+ See 12 more…
in vitro differentiated cells
embryonic stem cell
37
5
tissue
thymus
1
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