Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
4
total RNA-seq
small RNA-seq
1
WGBS
Assay category
67
DNA binding
4
Transcription
1
DNA methylation
Target of assay
51
transcription factor
14
histone
14
histone modification
10
RNA binding protein
10
chromatin remodeller
8
broad histone mark
6
narrow histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
8
June, 2019
5
May, 2019
3
July, 2019
2
March, 2020
Available data
105
bam
105
bigWig
100
bed narrowPeak
100
bigBed narrowPeak
54
fastq
bed bed3+
33
bed broadPeak
33
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
72
Homo sapiens
Biosample type
54
cell line
9
primary cell
9
tissue
Organ
604
pancreas
544
connective tissue
517
liver
415
adipose tissue
275
epithelium
235
heart
181
brain
180
vasculature
178
blood vessel
126
kidney
124
artery
66
bone element
60
limb
54
blood
54
bodily fluid
29
nerve
26
embryo
18
musculature of body
15
spleen
10
vein
8
skeleton
2
eye
1
pericardium
1
pituitary gland
Project
72
AMP
Genome assembly (visualization)
92
hg19
72
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
1
inconsistent control
assay_title!
small RNA-seq
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
72 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
WGBS
cell line
GM12878
54
primary cell
skeletal muscle satellite cell
7
1
skeletal muscle cell
1
tissue
muscle of leg
5
1
psoas muscle
2
skeletal muscle tissue
1
Download