Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
28
DNase-seq
15
total RNA-seq
6
WGBS
3
ATAC-seq
small RNA-seq
Assay category
106
DNA binding
31
DNA accessibility
15
Transcription
6
DNA methylation
Target of assay
94
histone
94
histone modification
57
broad histone mark
37
narrow histone mark
12
transcription factor
10
RNA binding protein
Date released
46
April, 2019
40
May, 2024
31
June, 2019
17
July, 2019
12
May, 2019
7
October, 2019
3
May, 2021
2
March, 2020
Available data
158
bigWig
137
bed narrowPeak
118
bam
89
bigBed narrowPeak
28
bed bed3+
28
bed broadPeak
28
bigBed broadPeak
15
tsv
6
bed bedMethyl
6
bigBed bedMethyl
Organism
158
Homo sapiens
Biosample type
149
tissue
8
primary cell
1
in vitro differentiated cells
Organ
633
pancreas
563
connective tissue
528
liver
421
adipose tissue
294
epithelium
265
heart
213
brain
204
kidney
191
vasculature
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
51
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
158
AMP
Genome assembly (visualization)
158
GRCh38
115
hg19
Lab
118
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
assay_title!
small RNA-seq
month_released!
March, 2023
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
158 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
WGBS
ATAC-seq
tissue
left cardiac atrium
40
1
heart left ventricle
28
3
3
2
2
heart
12
18
4
1
heart right ventricle
11
1
1
2
right atrium auricular region
7
2
2
1
+ See 3 more…
primary cell
cardiac fibroblast
3
3
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
in vitro differentiated cells
cardiac fibroblast
1
See all biosamples
Download