Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 11ChIP-seq
  • 5total RNA-seq
  • 2DNase-seq
  • 1ATAC-seq
  • small RNA-seq
Assay category
  • 11DNA binding
  • 5Transcription
  • 3DNA accessibility
Target of assay
  • 8control
  • 3RNA binding protein
  • 3transcription factor
Date released
  • 11October, 2018
  • 4July, 2019
  • 1February, 2020
  • 1June, 2019
  • 1November, 2018
  • 1October, 2017
Available data
  • 18bam
  • 13fastq
  • 10bigWig
  • 6bed narrowPeak
  • 5bigBed narrowPeak
  • 5tsv
  • 2bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
Organism
  • 19Homo sapiens
Biosample type
  • 19tissue
Organ
  • 19adipose tissue
  • 19connective tissue
Project
  • 19AMP
Genome assembly (visualization)
  • 10GRCh38
  • 10hg19
Lab
  • 19AMP-T2D consortium
assay_title!
  • small RNA-seq
BIOSAMPLE
ASSAY

19 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
omental fat pad11521
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego