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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
Assay category
30
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
65
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
15
November, 2017
7
November, 2018
6
January, 2019
2
December, 2018
Available data
30
bam
30
bed narrowPeak
30
bigBed narrowPeak
30
bigWig
30
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
30
Homo sapiens
Biosample type
30
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
20
liver
10
blood
10
bodily fluid
Project
30
AMP
Genome assembly (visualization)
30
hg19
28
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
assay_title!
small RNA-seq
organ_slims!
skeleton
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
cell line
HepG2
20
GM12878
10
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