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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
3
DNase-seq
2
ChIP-seq
Assay category
31
DNA accessibility
19
Transcription
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
3
June, 2019
1
February, 2020
Available data
30
bed narrowPeak
5
tsv
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
56
Homo sapiens
Biosample type
56
tissue
5
primary cell
Organ
545
connective tissue
503
pancreas
486
adipose tissue
358
liver
312
heart
298
kidney
261
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
81
musculature of body
73
artery
56
eye
43
nerve
25
spleen
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
56
AMP
Genome assembly (visualization)
30
hg19
3
GRCh38
Lab
56
AMP-T2D consortium
assay_title!
small RNA-seq
month_released!
April, 2020
BIOSAMPLE
ASSAY
56 results
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ATAC-seq
total RNA-seq
pCHi-C
DNase-seq
ChIP-seq
tissue
islet of Langerhans
1
14
4
2
retina
15
3
3
pigmented layer of retina
12
2
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