Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
60
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
Organism
69
Homo sapiens
Biosample type
61
cell line
8
primary cell
Organ
893
pancreas
772
liver
651
connective tissue
496
epithelium
480
adipose tissue
355
heart
273
kidney
245
brain
219
vasculature
215
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
57
eye
55
musculature of body
41
nerve
34
embryo
23
spleen
19
vein
18
lung
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
61
AMP
8
T1D
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
61
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_title!
small RNA-seq
files.file_type!
bed bed3+
month_released!
March, 2020
BIOSAMPLE
ASSAY
69 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
60
1
primary cell
peripheral blood mononuclear cell
8
Download