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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
67
DNA binding
7
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
other context
3
other post-translational modification
Date released
713
February, 2021
404
November, 2017
397
May, 2021
371
August, 2017
341
May, 2020
313
August, 2021
306
October, 2019
200
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
86
July, 2019
80
April, 2019
79
December, 2017
76
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
18
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
4
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
1
March, 2023
Available data
85
fastq
84
bam
77
bigWig
70
bed narrowPeak
70
bigBed narrowPeak
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
76
Homo sapiens
Biosample type
61
cell line
14
tissue
1
primary cell
Organ
50
liver
15
blood
15
bodily fluid
5
pancreas
5
spleen
Project
76
AMP
Genome assembly (visualization)
67
GRCh38
59
hg19
Lab
76
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
small RNA-seq
files.file_type!
bed bed3+
target.investigated_as!
other context
BIOSAMPLE
ASSAY
76 results
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Clear Filters
ChIP-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
3
2
liver
4
pancreas
2
1
body of pancreas
2
primary cell
pancreatic cell
1
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