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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
6
pCHi-C
3
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
19
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
21
October, 2019
4
February, 2023
2
March, 2020
1
February, 2020
1
July, 2019
1
June, 2019
Available data
bed narrowPeak
7
bam
7
tsv
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
28
tissue
2
primary cell
Organ
730
pancreas
606
connective tissue
475
adipose tissue
367
epithelium
342
liver
201
heart
167
kidney
151
bone element
103
vasculature
101
blood vessel
79
brain
67
artery
34
musculature of body
30
limb
28
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
1
hg19
Lab
30
AMP-T2D consortium
assay_title!
small RNA-seq
files.file_type!
bed narrowPeak
month_released!
December, 2019
BIOSAMPLE
ASSAY
30 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
4
2
1
retina
3
pigmented layer of retina
2
sigmoid colon
1
small intestine
1
primary cell
retinal pigment epithelial cell
1
1
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