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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
3
DNase-seq
1
WGBS
Assay category
64
DNA binding
3
DNA accessibility
1
DNA methylation
Target of assay
61
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
3
control
Date released
315
November, 2017
194
May, 2020
68
November, 2018
63
December, 2017
54
August, 2017
40
May, 2022
35
August, 2021
28
December, 2018
23
January, 2019
January, 2021
7
July, 2019
7
October, 2019
5
December, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
February, 2020
1
January, 2018
Available data
68
bam
68
fastq
64
bigWig
63
bed narrowPeak
63
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
68
Homo sapiens
Biosample type
61
cell line
7
tissue
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
68
AMP
Genome assembly (visualization)
64
GRCh38
61
hg19
Lab
68
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
small RNA-seq
month_released!
January, 2021
BIOSAMPLE
ASSAY
68 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
cell line
HepG2
45
1
GM12878
15
tissue
liver
4
2
right lobe of liver
1
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