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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
35
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
42
October, 2019
1
February, 2020
Available data
42
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
43
Homo sapiens
Biosample type
43
tissue
Organ
892
pancreas
661
connective tissue
642
liver
494
epithelium
483
adipose tissue
387
heart
348
kidney
230
vasculature
224
blood vessel
168
brain
158
bone element
135
artery
122
limb
80
musculature of body
61
blood
61
bodily fluid
61
eye
43
nerve
25
spleen
24
embryo
22
vein
18
ureter
16
skeleton
10
lung
5
gonad
5
ovary
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
43
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
43
AMP-T2D consortium
assay_title!
snATAC-seq
award.project!
T1D
files.file_type!
tagAlign
month_released!
December, 2017
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
35
5
2
1
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