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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
total RNA-seq
88
ChIP-seq
17
pCHi-C
snATAC-seq
Assay category
100
Transcription
88
DNA binding
Target of assay
88
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
153
May, 2021
45
May, 2020
February, 2023
7
March, 2020
Available data
186
bam
186
bigWig
98
tsv
88
bed narrowPeak
84
tagAlign
Organism
205
Homo sapiens
Biosample type
196
primary cell
5
tissue
4
cell line
Organ
8
pancreas
4
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
4178
AMP
205
T1D
141
HPAP
47
KPMP
9
LungMap
community
1
ITG
Genome assembly (visualization)
186
GRCh38
186
hg19
Lab
197
Kyle Gaulton, UCSD
8
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
assay_title!
snATAC-seq
award.project!
community
month_released!
February, 2023
September, 2020
BIOSAMPLE
ASSAY
205 results
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total RNA-seq
ChIP-seq
pCHi-C
primary cell
monocyte
53
84
1
B cell
2
1
CD8-positive, alpha-beta T cell
2
1
naive B cel
2
1
naive thymus-derived CD8-positive, alpha-beta T cell
2
1
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tissue
islet of Langerhans
2
2
thymus
1
cell line
EndoC_BH1
2
2
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