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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
85
ChIP-seq
17
pCHi-C
snATAC-seq
Assay category
96
Transcription
85
DNA binding
Target of assay
85
histone
85
histone modification
44
broad histone mark
41
narrow histone mark
Date released
153
May, 2021
45
May, 2020
February, 2023
March, 2020
Available data
181
bam
181
bigWig
96
tsv
85
bed narrowPeak
84
tagAlign
Organism
198
Homo sapiens
Biosample type
196
primary cell
1
cell line
1
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
epithelium
1
pancreas
1
thymus
Project
4097
AMP
200
HPAP
198
T1D
47
KPMP
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
181
GRCh38
181
hg19
Lab
197
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assay_title!
snATAC-seq
month_released!
February, 2023
March, 2020
organ_slims!
spleen
BIOSAMPLE
ASSAY
198 results
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total RNA-seq
ChIP-seq
pCHi-C
primary cell
monocyte
53
84
1
B cell
2
1
CD8-positive, alpha-beta T cell
2
1
naive B cel
2
1
naive thymus-derived CD8-positive, alpha-beta T cell
2
1
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cell line
EndoC_BH1
1
tissue
thymus
1
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