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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
84
ChIP-seq
17
pCHi-C
snATAC-seq
Assay category
96
Transcription
84
DNA binding
Target of assay
84
histone
84
histone modification
44
broad histone mark
40
narrow histone mark
Date released
152
May, 2021
45
May, 2020
February, 2023
Available data
180
bam
180
bigWig
96
tsv
84
bed narrowPeak
84
tagAlign
Organism
197
Homo sapiens
Biosample type
196
primary cell
1
tissue
Organ
pancreas
4
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
3395
AMP
197
T1D
85
HPAP
47
KPMP
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
180
GRCh38
180
hg19
Lab
197
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
assay_title!
snATAC-seq
month_released!
February, 2023
organ_slims!
pancreas
spleen
BIOSAMPLE
ASSAY
197 results
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total RNA-seq
ChIP-seq
pCHi-C
primary cell
monocyte
53
84
1
B cell
2
1
CD8-positive, alpha-beta T cell
2
1
naive B cel
2
1
naive thymus-derived CD8-positive, alpha-beta T cell
2
1
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tissue
thymus
1
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