Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
Hi-C
Assay category
6
3D chromatin structure
Date released
3
October, 2022
1
March, 2020
1
March, 2023
1
October, 2019
Available data
613
bigWig
609
bam
382
fastq
295
bed narrowPeak
270
tsv
132
zippedFastqFolder
109
bigBed narrowPeak
100
tagAlign
49
bed broadPeak
49
bigBed broadPeak
37
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
1
tar
Organism
6
Homo sapiens
Biosample type
11
tissue
6
primary cell
4
in vitro differentiated cells
2
cell line
Organ
5
epithelium
3
pancreas
2
blood vessel
2
vasculature
2
vein
Project
3
HPAP
2
AMP
1
ITG
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
1
ITG
Audit category:
4
audit script error
assay_title!
snATAC-seq
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
6 results
search-icon
table-tab-icon
Clear Filters
Hi-C
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
Download