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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
total RNA-seq
4
Hi-C
2
ATAC-seq
2
WGBS
1
RRBS
1
pCHi-C
Assay category
6
Transcription
4
3D chromatin structure
3
DNA methylation
2
DNA accessibility
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
March, 2020
3
February, 2020
Available data
11
bigWig
10
bam
7
tsv
2
bed bed3+
2
bed bedMethyl
2
bed narrowPeak
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
2
hic
Organism
16
Homo sapiens
Biosample type
10
tissue
6
primary cell
Organ
32
heart
20
brain
20
connective tissue
20
pancreas
19
epithelium
16
vasculature
15
blood vessel
15
musculature of body
13
adipose tissue
13
kidney
13
liver
5
limb
3
artery
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
eye
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
16
AMP
Genome assembly (visualization)
13
hg19
9
GRCh38
Lab
16
AMP-T2D consortium
assay_title!
snATAC-seq
files.file_type!
bed bed3
BIOSAMPLE
ASSAY
16 results
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total RNA-seq
Hi-C
ATAC-seq
WGBS
RRBS
pCHi-C
tissue
aorta
1
1
2
1
thoracic aorta
2
1
ascending aorta
1
coronary artery
1
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
endothelial cell of umbilical vein
1
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