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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
snATAC-seq
1
ATAC-seq
1
pCHi-C
Assay category
64
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
5
histone
5
histone modification
5
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
4
October, 2019
1
January, 2018
1
March, 2020
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
1
tsv
Organism
66
Homo sapiens
Biosample type
61
cell line
5
tissue
Organ
914
pancreas
728
liver
662
connective tissue
496
epithelium
488
adipose tissue
358
heart
267
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
61
blood
61
bodily fluid
54
eye
41
nerve
39
musculature of body
37
embryo
24
spleen
18
vein
16
skeleton
10
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
66
AMP
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_title!
snATAC-seq
files.file_type!
bed broadPeak
month_released!
June, 2019
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
ATAC-seq
pCHi-C
cell line
GM12878
60
1
tissue
islet of Langerhans
4
ovary
1
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