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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
ATAC-seq
Assay category
15
Transcription
3
DNA binding
1
DNA accessibility
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
February, 2023
21
October, 2019
1
February, 2020
1
June, 2019
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
bigBed bedMethyl
1
tsv
Organism
23
Homo sapiens
Biosample type
22
tissue
1
primary cell
Organ
256
pancreas
213
kidney
167
liver
165
epithelium
131
heart
99
connective tissue
93
bone element
65
adipose tissue
61
brain
45
blood vessel
45
vasculature
31
limb
24
musculature of body
23
eye
21
artery
12
nerve
10
lung
9
spleen
8
embryo
8
skeleton
7
vein
6
blood
6
bodily fluid
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Lab
23
AMP-T2D consortium
assay_title!
snATAC-seq
files.file_type!
bigBed bedMethyl
bigWig
month_released!
February, 2023
BIOSAMPLE
ASSAY
23 results
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total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
14
4
2
1
retina
1
primary cell
retinal pigment epithelial cell
1
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