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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
36
DNase-seq
4
total RNA-seq
2
ATAC-seq
1
WGBS
Assay category
65
DNA binding
38
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
17
control
14
narrow histone mark
Date released
68
October, 2019
32
June, 2019
7
May, 2019
1
July, 2019
Available data
108
bam
91
bigWig
86
bed narrowPeak
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
108
Homo sapiens
Biosample type
108
tissue
Organ
689
pancreas
681
liver
593
connective tissue
442
adipose tissue
317
epithelium
243
brain
211
heart
185
vasculature
180
blood vessel
144
kidney
114
limb
102
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
embryo
24
spleen
20
vein
18
ureter
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
108
AMP
Genome assembly (visualization)
90
GRCh38
90
hg19
Lab
108
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
snATAC-seq
organ_slims!
embryo
skeleton
BIOSAMPLE
ASSAY
108 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
35
2
4
1
tibial artery
23
2
1
muscle of leg
7
13
1
muscle of arm
17
forelimb muscle
1
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