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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
ChIP-seq
46
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
127
DNA binding
56
DNA accessibility
Target of assay
66
histone
66
histone modification
59
transcription factor
41
broad histone mark
25
narrow histone mark
14
RNA binding protein
10
chromatin remodeller
Date released
39
May, 2019
35
February, 2023
34
October, 2019
27
December, 2018
15
January, 2019
12
February, 2021
12
November, 2018
5
June, 2019
2
July, 2019
2
November, 2017
Available data
240
bam
205
bigWig
183
bed narrowPeak
133
bigBed narrowPeak
68
tsv
63
fastq
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
183
Homo sapiens
Biosample type
100
tissue
66
cell line
17
primary cell
Organ
441
liver
203
brain
191
heart
183
kidney
174
pancreas
151
epithelium
133
vasculature
129
blood vessel
92
limb
74
artery
70
connective tissue
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
vein
8
adipose tissue
8
bone element
8
skeleton
1
pituitary gland
Project
183
AMP
Genome assembly (visualization)
182
GRCh38
147
hg19
Lab
183
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_title!
snATAC-seq
month_released!
October, 2018
BIOSAMPLE
ASSAY
183 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
cell line
GM12878
54
smooth muscle cell of the coronary artery
4
8
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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