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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
39
ATAC-seq
snATAC-seq
Assay category
52
Transcription
41
DNA methylation
39
DNA accessibility
Date released
113
May, 2022
19
September, 2020
Available data
3166
bam
2957
bigWig
1576
tsv
1553
bed narrowPeak
1249
fastq
857
bigBed narrowPeak
398
tagAlign
244
bed broadPeak
207
bigBed broadPeak
194
bed bed3+
132
zippedFastqFolder
98
txt
32
bed bedMethyl
32
bigBed bedMethyl
bedpe bed3+
22
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
132
Homo sapiens
Biosample type
132
primary cell
Organ
80
epithelium
80
pancreas
Project
132
HPAP
Lab
132
Klaus Kaestner, Upenn
assay_title!
snATAC-seq
files.file_type!
bedpe bed3+
organ_slims!
kidney
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
132 results
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single cell RNA-seq
WGBS
ATAC-seq
primary cell
Langerhans cell
52
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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