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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
7
ATAC-seq
1
Hi-C
Assay category
34
DNA binding
7
DNA accessibility
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
688
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
304
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
203
February, 2023
178
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
9
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
Available data
42
fastq
37
bigWig
34
bam
30
bed narrowPeak
30
bigBed narrowPeak
Organism
42
Homo sapiens
Biosample type
28
cell line
7
primary cell
7
tissue
Organ
27
blood
27
bodily fluid
7
epithelium
7
pancreas
7
spleen
1
liver
Project
35
AMP
7
HPAP
Genome assembly (visualization)
37
GRCh38
30
hg19
Lab
35
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
1
inconsistent control
assay_title!
snATAC-seq
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
cell line
GM12878
27
HepG2
1
primary cell
pancreatic alpha cell
5
pancreatic beta cell
2
tissue
spleen
7
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