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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ATAC-seq
41
WGBS
34
single cell RNA-seq
26
total RNA-seq
snATAC-seq
Assay category
84
DNA accessibility
60
Transcription
41
DNA methylation
Date released
688
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
304
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
203
February, 2023
178
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
9
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
Available data
113
zippedFastqFolder
38
bed narrowPeak
31
fastq
27
bigWig
24
bam
6
txt
Organism
185
Homo sapiens
Biosample type
120
primary cell
65
tissue
Organ
111
pancreas
87
epithelium
40
liver
1
musculature of body
Project
120
HPAP
65
AMP
Genome assembly (visualization)
38
hg19
7
GRCh38
Lab
120
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
1
AMP-T2D consortium
assay_title!
snATAC-seq
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
185 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
total RNA-seq
primary cell
pancreatic alpha cell
27
25
Langerhans cell
33
pancreatic beta cell
15
16
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
18
6
skeletal muscle tissue
1
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