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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
14
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
broad histone mark
3
other context
3
other post-translational modification
narrow histone mark
Date released
9
November, 2018
7
December, 2018
1
January, 2019
1
March, 2020
1
October, 2017
Available data
18
bam
18
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
784
pancreas
689
liver
607
connective tissue
459
adipose tissue
431
epithelium
318
kidney
296
heart
165
vasculature
160
blood vessel
159
bone element
121
artery
99
brain
73
limb
62
musculature of body
60
blood
60
bodily fluid
58
eye
25
embryo
19
nerve
19
spleen
18
ureter
16
skeleton
10
lung
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
10
GRCh38
8
hg19
Lab
19
AMP-T2D consortium
assay_title!
snATAC-seq
target.investigated_as!
broad histone mark
narrow histone mark
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
14
2
1
1
1
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