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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
19
ChIP-seq
3
Hi-C
3
pCHi-C
3
total RNA-seq
2
WGBS
1
RRBS
Assay category
96
Transcription
19
DNA binding
3
3D chromatin structure
3
DNA methylation
Target of assay
18
control
1
histone
1
histone modification
1
narrow histone mark
Date released
92
August, 2021
11
April, 2019
6
May, 2019
5
March, 2020
3
February, 2020
3
July, 2019
2
February, 2021
1
February, 2023
1
October, 2019
Available data
98
tsv
18
bam
3
bedpe bed3+
3
hic
2
tagAlign
1
bed bedMethyl
1
bed narrowPeak
1
bigBed bedMethyl
1
bigWig
Organism
124
Homo sapiens
Biosample type
122
tissue
primary cell
2
cell line
Organ
257
liver
157
pancreas
138
kidney
124
heart
111
connective tissue
92
bone element
67
adipose tissue
62
brain
53
eye
49
epithelium
40
musculature of body
30
blood vessel
30
vasculature
26
limb
20
lung
13
artery
12
nerve
9
spleen
8
embryo
8
skeleton
7
blood
7
bodily fluid
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
124
AMP
Genome assembly (visualization)
GRCh38
178
hg19
Lab
124
AMP-T2D consortium
assay_title!
snDrop-seq
assembly!
GRCh38
biosample_type!
primary cell
BIOSAMPLE
ASSAY
124 results
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single cell RNA-seq
ChIP-seq
Hi-C
pCHi-C
total RNA-seq
WGBS
RRBS
tissue
heart left ventricle
18
7
1
1
2
1
heart right ventricle
17
2
1
1
right cardiac atrium
18
1
1
left cardiac atrium
18
aortic valve
4
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cell line
smooth muscle cell of the coronary artery
2
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