Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
Assay category
51
DNA binding
Target of assay
26
histone
26
histone modification
25
transcription factor
15
broad histone mark
13
chromatin remodeller
11
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
21
November, 2017
11
August, 2017
11
December, 2017
5
November, 2018
2
February, 2018
1
October, 2018
Available data
51
bam
51
bigWig
51
fastq
49
bed narrowPeak
30
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
10
bed bed3+
Organism
51
Homo sapiens
Biosample type
26
cell line
17
in vitro differentiated cells
6
tissue
primary cell
2
stem cell
Organ
27
liver
6
connective tissue
5
pancreas
3
embryo
1
epithelium
Project
51
AMP
Genome assembly (visualization)
51
hg19
47
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
51
inconsistent control read length
8
inconsistent control run_type
2
inconsistent assembly
assay_title!
snDrop-seq
audit.ERROR.category!
inconsistent control
biosample_type!
primary cell
month_released!
July, 2018
BIOSAMPLE
ASSAY
51 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
26
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
tissue
pancreas
4
body of pancreas
1
liver
1
stem cell
hESC
2
See all biosamples
Download