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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
DNase-seq
18
ChIP-seq
Assay category
30
DNA accessibility
18
DNA binding
Target of assay
15
histone
15
histone modification
8
narrow histone mark
7
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
April, 2019
33
June, 2019
15
May, 2019
Available data
177
bigWig
168
tsv
155
bam
144
bed narrowPeak
48
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
48
Homo sapiens
Biosample type
42
tissue
6
primary cell
Organ
331
liver
127
brain
91
pancreas
86
kidney
84
limb
83
vasculature
79
blood vessel
76
epithelium
53
blood
53
bodily fluid
48
heart
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
48
AMP
Genome assembly (visualization)
48
GRCh38
45
hg19
Lab
48
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
snDrop-seq
audit.ERROR.category!
inconsistent control
month_released!
April, 2019
BIOSAMPLE
ASSAY
48 results
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DNase-seq
ChIP-seq
tissue
heart
18
right atrium auricular region
2
7
coronary artery
2
3
right cardiac atrium
5
heart left ventricle
3
+ See 2 more…
primary cell
cardiac fibroblast
3
3
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