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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
374
ChIP-seq
5
ATAC-seq
Assay category
374
DNA binding
5
DNA accessibility
Target of assay
244
transcription factor
88
histone
88
histone modification
77
control
66
recombinant protein
50
broad histone mark
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
712
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
76
December, 2017
65
October, 2018
59
September, 2020
58
September, 2018
57
April, 2019
57
March, 2020
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
4
August, 2018
4
October, 2022
3
June, 2018
3
March, 2023
1
August, 2022
Available data
374
bam
325
fastq
309
bigWig
289
bed narrowPeak
289
bigBed narrowPeak
57
bed broadPeak
55
bigBed broadPeak
52
tagAlign
3
tar
2
bed bed3+
Organism
379
Homo sapiens
Biosample type
308
cell line
60
tissue
11
primary cell
Organ
308
liver
60
brain
11
pancreas
9
epithelium
4
vasculature
2
blood vessel
Project
379
AMP
Genome assembly (visualization)
274
hg19
259
GRCh38
Lab
379
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
16
inconsistent control read length
4
inconsistent control run_type
assay_title!
snDrop-seq
biosample_type!
stem cell
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
379 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
308
tissue
layer of hippocampus
15
caudate nucleus
10
substantia nigra
10
cingulate gyrus
9
middle frontal area 46
9
+ See 2 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
+ See 1 more…
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