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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
3
ATAC-seq
2
DNase-seq
1
RRBS
Assay category
106
DNA binding
5
DNA accessibility
1
DNA methylation
Target of assay
63
histone
63
histone modification
34
narrow histone mark
28
broad histone mark
24
transcription factor
19
control
6
RNA binding protein
3
chromatin remodeller
Date released
324
November, 2017
112
August, 2017
76
February, 2023
73
September, 2018
62
November, 2018
48
July, 2018
46
December, 2017
45
February, 2021
41
September, 2020
39
February, 2018
38
April, 2018
28
December, 2018
23
January, 2019
7
August, 2020
5
January, 2018
5
September, 2017
4
August, 2018
3
June, 2018
2
October, 2018
Available data
112
bam
112
fastq
94
bigWig
76
bed narrowPeak
26
tagAlign
20
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
112
Homo sapiens
Biosample type
tissue
58
primary cell
54
in vitro differentiated cells
Organ
54
connective tissue
41
pancreas
29
epithelium
Project
112
AMP
Genome assembly (visualization)
95
hg19
91
GRCh38
Lab
112
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
assay_title!
snDrop-seq
biosample_type!
tissue
BIOSAMPLE
ASSAY
112 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
primary cell
skeletal muscle myoblast
15
1
1
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
in vitro differentiated cells
adipocyte
53
1
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