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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
35
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
42
October, 2019
1
February, 2020
Available data
42
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
43
Homo sapiens
Biosample type
43
tissue
Organ
926
pancreas
785
liver
679
connective tissue
512
epithelium
488
adipose tissue
378
heart
345
kidney
282
brain
230
vasculature
225
blood vessel
159
bone element
141
artery
121
limb
87
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
22
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
pericardium
1
skin of body
1
spinal cord
1
thymus
Project
43
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
43
AMP-T2D consortium
assay_title!
snDrop-seq
files.file_type!
bigBed bedMethyl
month_released!
March, 2020
organ_slims!
pericardium
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
35
5
2
1
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