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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
25
ATAC-seq
1
Hi-C
Assay category
44
Transcription
25
DNA accessibility
1
3D chromatin structure
Date released
680
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
44
bam
44
tsv
25
bed narrowPeak
19
bigWig
1
bedpe bed3+
1
hic
Organism
70
Homo sapiens
Biosample type
65
tissue
5
in vitro differentiated cells
Organ
56
pancreas
epithelium
12
brain
3
adipose tissue
3
blood vessel
3
connective tissue
3
heart
3
limb
3
vasculature
2
artery
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
70
AMP
Genome assembly (visualization)
45
hg19
44
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_title!
snDrop-seq
month_released!
July, 2019
organ_slims!
epithelium
BIOSAMPLE
ASSAY
70 results
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total RNA-seq
ATAC-seq
Hi-C
tissue
islet of Langerhans
19
19
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
adipose tissue(adipose white tissue)
1
amygdala
1
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in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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