Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
21
ChIP-seq
3
Hi-C
3
pCHi-C
total RNA-seq
2
WGBS
Assay category
93
Transcription
21
DNA binding
3
3D chromatin structure
2
DNA methylation
Target of assay
20
control
1
histone
1
histone modification
1
narrow histone mark
Date released
92
August, 2021
11
April, 2019
6
May, 2019
5
March, 2020
2
February, 2021
2
July, 2019
2
June, 2019
1
February, 2023
1
October, 2019
Available data
95
tsv
20
bam
3
bedpe bed3+
3
hic
bed bedMethyl
2
bigBed bedMethyl
2
tagAlign
1
bed narrowPeak
1
bigWig
Organism
122
Homo sapiens
Biosample type
118
tissue
2
cell line
2
primary cell
Organ
236
pancreas
228
liver
169
epithelium
122
heart
111
connective tissue
96
kidney
89
bone element
65
adipose tissue
55
brain
41
vasculature
40
blood vessel
38
musculature of body
35
eye
23
limb
20
lung
blood
15
bodily fluid
11
artery
11
nerve
10
vein
9
spleen
8
embryo
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
122
AMP
Genome assembly (visualization)
GRCh38
117
hg19
Lab
122
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
assembly!
GRCh38
files.file_type!
bed bedMethyl
organ_slims!
blood
BIOSAMPLE
ASSAY
122 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ChIP-seq
Hi-C
pCHi-C
WGBS
tissue
heart left ventricle
18
7
1
1
2
heart right ventricle
17
2
1
1
right cardiac atrium
18
1
1
left cardiac atrium
18
aortic valve
4
+ See 9 more…
cell line
smooth muscle cell of the coronary artery
2
primary cell
cardiac fibroblast
2
See all biosamples
Download